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Ghost introgression in ricefishes of the genus Adrianichthys in an ancient Wallacean lake

http://hdl.handle.net/20.500.12000/0002020985
http://hdl.handle.net/20.500.12000/0002020985
13a80c4b-e1db-47a5-97eb-6f7b1e59a7a1
名前 / ファイル ライセンス アクション
Y_No36p1484_2023.pdf Y_No36p1484_2023.pdf (369 KB)
Item type 琉球大学リポジトリ登録用アイテムタイプ(1)
公開日 2024-12-26
タイトル
タイトル Ghost introgression in ricefishes of the genus Adrianichthys in an ancient Wallacean lake
言語 en
作成者 Yamahira, Kazunori

× Yamahira, Kazunori

en Yamahira, Kazunori
Tropical Biosphere Research Center University of the Ryukyus

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Kobayashi, Hirozumi

× Kobayashi, Hirozumi

en Kobayashi, Hirozumi
Tropical Biosphere Research Center University of the Ryukyus

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Kakioka, Ryo

× Kakioka, Ryo

en Kakioka, Ryo
Tropical Biosphere Research Center University of the Ryukyus

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Montenegro, Javier

× Montenegro, Javier

en Montenegro, Javier
Tropical Biosphere Research Center University of the Ryukyus

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Masengi, Kawilarang W. A.

× Masengi, Kawilarang W. A.

en Masengi, Kawilarang W. A.
Faculty of Fisheries and Marine Science Sam Ratulangi University Manado

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Okuda, Noboru

× Okuda, Noboru

en Okuda, Noboru
Research Center for Inland Seas Kobe University

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Nagano, Atsushi J.

× Nagano, Atsushi J.

en Nagano, Atsushi J.
Institute for Advanced Biosciences Keio University
Faculty of Agriculture Ryukoku University

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Tanaka, Rieko

× Tanaka, Rieko

en Tanaka, Rieko
World Medaka Aquarium Nagoya Higashiyama Zoo and Botanical Gardens

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Naruse, Kiyoshi

× Naruse, Kiyoshi

en Naruse, Kiyoshi
Laboratory of Bioresources National Institute for Basic Biology

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Tatsumoto, Shoji

× Tatsumoto, Shoji

en Tatsumoto, Shoji
Exploratory Research Center on Life and Living Systems (ExCELLS) National Institutes of Natural Sciences

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Go, Yasuhiro

× Go, Yasuhiro

en Go, Yasuhiro
Exploratory Research Center on Life and Living Systems (ExCELLS) National Institutes of Natural Sciences
School of Life Science The Graduate University for Advanced Studies (SOKENDAI)
National Institute for Physiological Sciences National Institutes of Natural Sciences

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Ansai, Satoshi

× Ansai, Satoshi

en Ansai, Satoshi
Graduate School of Agriculture Kyoto University

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Kusumi, Junko

× Kusumi, Junko

en Kusumi, Junko
Faculty of Social and Cultural Studies Kyushu University

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アクセス権
アクセス権 open access
アクセス権URI http://purl.org/coar/access_right/c_abf2
権利情報
言語 en
権利情報 © 2023 European Society for Evolutionary Biology
主題
言語 en
主題Scheme Other
主題 demography
主題
言語 en
主題Scheme Other
主題 extinct lineage
主題
言語 en
主題Scheme Other
主題 introgressive hybridization
主題
言語 en
主題Scheme Other
主題 reproductive isolation
主題
言語 en
主題Scheme Other
主題 secondary contact
主題
言語 en
主題Scheme Other
主題 Sulawesi
内容記述
内容記述タイプ Abstract
内容記述 Because speciation might have been promoted by ancient introgression from an extinct lineage, it is important to detect the existence of `ghost introgression' in focal taxa and examine its contribution to their diversification. In this study, we examined possible ghost introgression and its contributions to the diversification of ricefishes of the genus Adrianichthys in Lake Poso, an ancient lake on Sulawesi Island, in which some extinctions are known to have occurred. Population‐genomic analysis revealed that two extant Adrianichthys species, A. oophorus and A. poptae are reproductively isolated from each other. Comparisons of demographic models demonstrated that introgression from a ghost population, which diverged from the common ancestor of A. oophorus and A. poptae, is essential for reconstructing the demographic history of Adrianichthys. The best model estimated that the divergence of the ghost population greatly predated the divergence between A. oophorus and A. poptae, and that the ghost population secondarily contacted the two extant species within Lake Poso more recently. Genome scans and simulations detected a greatly divergent locus, which cannot be explained without ghost introgression. This locus was also completely segregated between A. oophorus and A. poptae. These findings suggest that variants that came from a ghost population have contributed to the divergence between A. oophorus and A. poptae, but the large time‐lag between their divergence and ghost introgression indicates that the contribution of introgression may be restricted.
言語 en
出版者
出版者 Oxford University Press
言語 en
言語
言語 eng
資源タイプ
資源タイプ識別子 http://purl.org/coar/resource_type/c_6501
資源タイプ journal article
出版タイプ
出版タイプ AM
出版タイプResource http://purl.org/coar/version/c_ab4af688f83e57aa
関連情報
関連タイプ isVersionOf
識別子タイプ DOI
関連識別子 https://doi.org/10.1111/jeb.14223
収録物識別子
収録物識別子タイプ EISSN
収録物識別子 1420-9101
収録物名
収録物名 Journal of Evolutionary Biology
言語 en
書誌情報
巻 36, 号 10, p. 1484-1493, 発行日 2023-10-01
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